PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004487636.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 466aa    MW: 52023.9 Da    PI: 6.3566
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004487636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.66.7e-063583961154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_004487636.1 358 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 396
                     5778999**********998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.582347396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-10357402IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.53E-7357400No hitNo description
SMARTSM003530.0024358402IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-8361400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MADDDQFHHS SGNSNWWDTS RNNMRFDQSG TSQTSSSNNI VDFAWQNSDM VDIKPRSSSM  60
DDNSSIVFHD DTQKLQQPQD SSTTSIDPNL HMMGLGLSSH AMDWNQPPLI RSEKGSSENN  120
LRSMLEENLS STRNNFEQEN MMGLCQGQIQ WRSSSDQKLF SAVESSSNEF KQVNNRSFSL  180
DQNQFSPSYS SGESNVTSQG LMDYGTPSIL QGLLGSDHSN NIQHQQQQGS FENRPMSFSY  240
TTNNYGLNSN NELNIPSNWS TKVPQFLRTN SPPKQQPPNN QLHFTNNTPF WNASEAANSI  300
KDVRSSFFPS LQPQFSTPNF DSQAKNISEV GVVKKSGSEP APKRTRNETP STLPAFKVRK  360
EKMGDRITAL QQLVSPFGKT DTASVLSEAI EYIKFLHEQV LSTPYMKSGA PTQNIQQNSG  420
KSKKSEGAKQ DLRSRGLCLV PVSSTFPVTH ETTVDFWTPT FGGTSR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150392e-42AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004487636.10.0PREDICTED: transcription factor bHLH123-like isoform X3
TrEMBLG7ITL90.0G7ITL9_MEDTR; BHLH transcription factor-like protein
STRINGGLYMA12G34490.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.12e-65bHLH family protein